Andres Chousal
Community@achousal
Bioinformatics research !
Agent Skills by Andres Chousal
Showing 31 vetted skills indexed across 1 GitHub repositories.
achousalexperiment
Automates recording of experiment parameters, results, and artifacts into structured notes.
achousalreweave
Reconcile older notes with newer context by adding connections and sharpening claims.
achousalonboard
Scan lab directories and generate validated vault artifacts for onboarding.
achousalgraph
Route natural language queries to knowledge graph operations and output actionable insights.
achousalrefactor
Detect configuration drift between ops/config.yaml and ops/derivation.md.
achousalinit
Coordinate knowledge seeding to orient, generate, and wire claims into topic maps.
achousalreduce
Convert raw source material into structured domain notes with provenance.
achousalreview
Evaluate hypotheses across six review modes and log structured critique scores.
achousalvalidate
Validate notes against domain templates for required fields and link health.
achousallearn
Research topics via Exa deep researcher, web search, or basic search with provenance metadata.
achousalmeta-review
Analyze tournament debates and hypothesis reviews to produce actionable meta-reviews.
achousalverify
Verify note quality via recite, validate, and review checks.
achousalproject
Register, update, and query research project notes in the EngramR vault.
achousalresearch
Coordinate autonomous agents to generate, debate, and evolve research hypotheses.
achousallandscape
Cluster hypotheses by tags and keywords into per-goal landscape files.
achousalralph
Orchestrate queue processing with isolated subagents per phase.
achousaltournament
Rank hypotheses through pairwise debates using Elo ratings.
achousaleda
Automate exploratory data analysis on tabular datasets with PII auto-redaction.
achousalreflect
Identify semantic connections between notes and update MOCs.
achousalplot
Apply a canonical plotting theme to Python and R figures.
achousalremember
Capture user friction as methodology notes with category, description, and provenance.
achousalfederation-sync
Synchronize claims and hypotheses across peer vaults via a shared exchange directory.
achousalliterature
Index and summarize scholarly literature from PubMed, arXiv, Semantic Scholar, and OpenAlex into structured Obsidian notes.
achousalevolve
Evolve top-ranked hypotheses into testable versions with provenance and Elo scores.