Guangsheng Liu avatar

Guangsheng Liu

Community

@hello-qm · La Jolla

22Followers
|
30Public Repos
|
73Published Skills

Computational Catalysis

Agent Skills by Guangsheng Liu

Showing 73 vetted skills indexed across 1 GitHub repositories.

Hello-QMHello-QM
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catgo

Automate crystal structure manipulation and DFT/MD input generation.

Community
Advanced
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vasp-md

Automates ab initio molecular dynamics simulations with VASP for finite-temperature trajectories.

Community
Advanced
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orca-freq

Compute vibrational frequencies, IR intensities, and thermochemistry for molecular systems using ORCA.

Community
Advanced
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siesta

Automate SIESTA DFT workflow creation, SCF setup, and geometry optimization on HPC.

Community
Intermediate
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substitutional-doping

Replace host atoms with dopants in structures for automated geometry optimization workflows.

Community
Advanced
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strain-deformation

Apply uniaxial, biaxial, hydrostatic, and shear strains to periodic structures.

Community
Advanced
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gaussian

Automate Gaussian quantum chemistry calculation setup, execution, and output management.

Community
Advanced
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slab-generation

Generate crystal surface slabs from bulk structures using Miller indices, layers, and vacuum.

Community
Advanced
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phonopy

Compute phonon spectra, DOS, and thermodynamic data from DFT forces.

Community
Advanced
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deepmd-inference

Predict energies, forces, and stresses for atomic structures with DeePMD-kit.

Community
Advanced
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energy-diagram

Generate Plotly-compatible reaction energy diagrams from Gibbs energies.

Community
Advanced
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dos-analysis

Analyze DOS, PDOS, and d-band centers from completed DFT calculations.

Community
Advanced
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abinit

Automate ABINIT-based DFT workflows for DFPT phonons, GW, and BSE calculations.

Community
Intermediate
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packmol

Generate initial molecular configurations for MD simulations using Packmol.

Community
Intermediate
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adsorbate-placement

Place adsorbates on surfaces and generate slab+adsorbate models for DFT workflows.

Community
Intermediate
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heterostructure

Design lattice-matched heterostructures using the Zur-McGill ZSL algorithm.

Community
Advanced
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workflow_errors

Diagnose and fix CatGo workflow engine errors like HPC failures and missing POTCARs.

Community
Advanced
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orca-uv-vis

Generate ORCA TD-DFT UV-Vis inputs and plot absorption spectra.

Community
Advanced
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reacnetgenerator

Extract and visualize reaction networks from reactive MD trajectories.

Community
Intermediate
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convergence_issues

Diagnose SCF and ionic convergence failures in VASP and ORCA calculations.

Community
Intermediate
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co2rr-selectivity

Analyze CO2 reduction reaction intermediates and branching pathways to predict product outcomes.

Community
Advanced
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cp2k-geo-opt

Run CP2K geometry relaxations with GPW for large bulk, slab, and adsorbate systems.

Community
Advanced
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gibbs-free-energy

Calculate Gibbs energy corrections from DFT data using E_DFT, ZPE, and TS.

Community
Advanced
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intercalation

Insert guest ions into layered material interlayer spaces for battery and catalysis workflows.

Community
Advanced