Agent Skills by hoangngo
Showing 134 vetted skills indexed across 1 GitHub repositories.
polars-bio
Process genomic intervals with SQL and bioinformatics file I/O.
benchling-integration
Automate Benchling registry, inventory, and notebook data management.
networkx
Create, analyze, and visualize graph structures with networkx and matplotlib.
anndata
Manage annotated data matrices for genomics and high-dimensional datasets.
scikit-survival
Model and evaluate censored survival data with scikit-survival.
qiskit
Create, optimize, and execute quantum circuits on simulators and hardware.
scientific-brainstorming
Generate interdisciplinary research hypotheses through guided conversational brainstorming techniques.
pymc
Build hierarchical Bayesian models with PyMC and validate via convergence diagnostics.
research-lookup
Retrieve current research from web sources and scholarly databases with citations.
shap
Explain machine learning predictions by quantifying feature importance and detecting bias.
umap-learn
Reduce high-dimensional datasets into lower-dimensional embeddings for visualization.
imaging-data-commons
Query, download, and visualize cancer imaging datasets from the NCI Imaging Data Commons.
geomaster
Perform geospatial analysis with geopandas, rasterio, shapely, and pyproj.
sympy
Simplify and manipulate symbolic mathematical expressions across algebra, calculus, and linear algebra.
vaex
Analyze and visualize out-of-core tabular datasets with lazy evaluation.
dask
Execute parallel Python data processing on clusters for large datasets.
get-available-resources
Detects CPU, GPU, memory, and disk resources for scientific computing.
parallel-web
Search academic sources, extract webpage content, and enrich CSV datasets.
exploratory-data-analysis
Analyze scientific data files for type detection, metadata extraction, and quality assessment.
iso-13485-certification
Develop ISO 13485 compliant documentation and perform gap analysis for medical device QMS.
esm
Design protein sequences and predict structures using deep language models.
scientific-schematics
Generate scientific flowcharts, pathways, and system architectures from natural language prompts.
arboreto
Infer gene regulatory networks from expression datasets using distributed Python algorithms.
geniml
Convert genomic interval data from BED files into structured embeddings.