Sam Abbott
Community@seabbs · Bristol
Real-time infectious disease modelling. Developing tools and methods for outbreak response, routine surveillance, and pandemic preparedness.
Agent Skills by Sam Abbott
Showing 31 vetted skills indexed across 1 GitHub repositories.
seabbscommit
Generate conventional Git commits with proper identity and co-author trailers.
seabbscreate-note
Convert Markdown files into Obsidian notes with frontmatter and daily note links.
seabbsgrant-application-setup
Organize grant applications with standardized repository structures and templates.
seabbslint
Lint and format code across languages with Git integration.
seabbsanalyzing-research-papers
Extract main contributions and methodological details from research papers into structured summaries.
seabbstaskfile-automation
Guide developers to discover and run Taskfile automation commands.
seabbsadd-bot
Add seabbs-bot as a collaborator with push access to a GitHub repository.
seabbsacademic-writing-standards
Enforce academic writing standards across manuscript sections and citations.
seabbsgithub-dashboard
Aggregate GitHub notifications, PR statuses, and issues into action-oriented summaries.
seabbsimprove-coverage
Analyze untested code paths and generate focused tests to increase coverage.
seabbsrepo-activity
Analyze GitHub issues, pull requests, and contributor activity to generate markdown reports.
seabbstest
Run tests iteratively, fix failures, and commit when all pass.
seabbspreprint-search
Search arXiv, medRxiv, and bioRxiv for recent infectious disease modelling preprints and export a categorized Markdown report.
seabbsrepo-summary
Analyze GitHub repositories to generate structured markdown reports with activity metrics and code insights.
seabbsissue-reply
Draft concise GitHub issue replies based on the latest comments.
seabbsuk-news
Aggregate BBC News UK and Guardian UK headlines into categorized digests with summaries and links.
seabbsissue-summary
Summarize GitHub issue threads with metadata, last message quote, and next steps.
seabbsgrant-compliance-checking
Audit grant compliance across deliverables, milestones, and funder requirements.
seabbsformat-note
Tag unpublished Obsidian notes and link them to today's daily note.
seabbsdocs
Identify and fill documentation gaps across multi-language codebases.
seabbsminutes
Convert meeting transcripts into structured minutes with decisions and action items.
seabbspr
Generate a complete pull request from a GitHub issue.
seabbsjulia-development
Guide Julia package development with SciML-aligned standards and tooling.
seabbsreview
Lints code and generates prioritized, structured reports for commits, PRs, or repositories.