AbDev: Antibody Developability Assessment Skill
CommunityOpen-source antibody developability scoring.
Education & Research#benchmarking#developability#sequence-analysis#antibody#TAP#thera-sabdab#liability-scanning
Authorjunior1p
Version1.0.0
Installs0
System Documentation
What problem does it solve?
AbDev provides a fast, open-source workflow to assess antibody developability directly from amino acid sequences, surfacing liabilities, TAP metrics, and benchmarking against clinical therapeutics to guide lead optimization.
Core Features & Use Cases
- Layered evaluation across sequence liabilities, TAP profiling, and Thera-SAbDab benchmarking to generate a traffic-light developability scorecard.
- Supports VH/VL pairs and nanobody inputs, offline benchmarking, and JSON/scorecard outputs for integration into pipelines.
- Use case: screen multiple variants to triage candidates based on developed risk profiles and nearest-neighbor context.
Quick Start
Run AbDev on a VH:VL antibody sequence to generate a developability scorecard and machine-readable results.
Dependency Matrix
Required Modules
abnumberpandasnumpymatplotlibrequestsscipybiopythonflaskgunicorn
Components
Standard package💻 Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: AbDev: Antibody Developability Assessment Skill Download link: https://github.com/junior1p/AbDev/archive/main.zip#abdev-antibody-developability-assessment-skill Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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