academic-pipeline

Orchestrate the end-to-end academic pipeline from research to publication with integrity checks.

Updated Mar 21, 2026
One-click install
npx skills add https://github.com/ManfronEnrico/thesis-manifold --skill academic-pipeline-manfronenrico
Or copy as Structured Prompt for Agent
Please help me install this Agent Skill.
Skill: academic-pipeline
Source: https://github.com/ManfronEnrico/thesis-manifold/tree/main/.claude/skills/academic-pipeline
Command: npx skills add https://github.com/ManfronEnrico/thesis-manifold --skill academic-pipeline-manfronenrico

SYSTEM DOCUMENTATION & REQUIREMENTS

💡 This Skill includes references (resource) components.

What problem does it solve?

The Academic Pipeline orchestrator addresses the complexity of managing a long, multi-stage academic workflow by coordinating specialized skills, enforcing integrity gates, and providing reproducible, auditable transitions from research to publication.

Core Features & Use Cases

  • Orchestrates a ten-stage academic workflow (research -> write -> integrity checks -> review -> revise -> re-review -> re-revise -> final integrity check -> finalize), with mandatory integrity checkpoints and two-stage peer review.
  • Provides deterministic handoffs between sub-skills, versioned artifacts, and a centralized progress dashboard for auditability.
  • Supports mid-entry and external-review scenarios, with adaptive checkpointing and strict non-substantive duties for the orchestrator.

Quick Start

Start a full end-to-end pipeline by initiating Stage 1 RESEARCH with your topic, RQ, and initial bibliography.

Frequently Asked Questions about academic-pipeline

High-intent search queries and answers about installing and using this skill.

FAQPage Schema
How do I coordinate an end-to-end academic research pipeline from start to publication?

An academic research pipeline orchestrates the complete workflow from research to publication by coordinating specialized skills, enforcing mandatory integrity gates, and providing reproducible, auditable handoffs across all stages.

What is the best way to enforce reproducibility and integrity checks during academic writing?

To enforce reproducibility and integrity checks, apply a versioned academic pipeline with mandatory checkpoint gates, such as Stage 2.5 and Stage 4.5, ensuring deterministic handoffs and generating a comprehensive integrity report.

How does a two-stage peer review process work within an academic workflow pipeline?

A two-stage peer review process within an academic workflow pipeline coordinates sequential review and revision cycles, routing artifacts through strict integrity checkpoints before final publication to ensure auditable quality control.

Can I enter an academic pipeline mid-way if I already have a drafted paper?

Yes, the academic pipeline supports mid-entry scenarios for existing drafts by applying adaptive checkpointing, allowing you to join the workflow at later stages while still enforcing strict integrity checks and auditable handoffs.

What do I need to start the initial research stage of an academic pipeline?

To start the initial research stage of an academic pipeline, you need to provide your research topic, research questions, and an initial bibliography to begin orchestrating the end-to-end workflow.

Are there limitations to using an orchestrator for academic workflow management?

The orchestrator is strictly limited to non-substantive duties, meaning it coordinates the academic pipeline, manages versioned artifacts, and enforces integrity gates without altering the actual research content or peer review conclusions.