adaptyv

Submit FASTA protein sequences for automated experimental assays and retrieve results.

783|65|Updated Feb 27, 2026
One-click install
npx skills add https://github.com/LeonChaoX/qinyan-academic-skills --skill adaptyv-leonchaox
Or copy as Structured Prompt for Agent
Please help me install this Agent Skill.
Skill: adaptyv
Source: https://github.com/LeonChaoX/qinyan-academic-skills/tree/main/skills/08-%E8%9B%8B%E7%99%BD%E8%B4%A8%E5%B7%A5%E7%A8%8B%E4%B8%8E%E7%BB%93%E6%9E%84%E7%94%9F%E7%89%A9%E5%AD%A6/adaptyv
Command: npx skills add https://github.com/LeonChaoX/qinyan-academic-skills --skill adaptyv-leonchaox

SYSTEM DOCUMENTATION & REQUIREMENTS

💡 This Skill requires requests, python-dotenv, and includes references (resource) components.

What problem does it solve?

This Skill helps you validate protein designs with a cloud lab pipeline instead of running time-consuming in-house wet-lab experiments. It streamlines submitting protein sequences for experimental assays and receiving results on binding, expression, thermostability, and enzyme activity.

Core Features & Use Cases

  • Automated protein testing: Submit FASTA protein sequences for assay execution and validation.
  • Multiple assay types: Run binding (e.g., BLI), expression testing, thermostability measurements, or enzyme activity assays.
  • Sequence optimization workflow support: Use recommended computational tools (e.g., NetSolP, SoluProt, SolubleMPNN, ESM) to improve sequence quality before testing.
  • API-driven experiment management: Authenticate, submit experiments via API, track status, and retrieve results.
  • Use case: For a set of antibody variants, optimize sequences for solubility and stability, submit a batch binding experiment against a target, then download kinetics and confidence metrics after completion.

Quick Start

Run a batch binding experiment by submitting your FASTA sequences with the experiment_type set to binding and using your ADAPTYV_API_KEY for authentication.

Frequently Asked Questions about adaptyv

High-intent search queries and answers about installing and using this skill.

FAQPage Schema
How do I submit protein sequences for wet-lab validation?

To submit protein sequences for wet-lab validation, you provide FASTA-formatted inputs, set the experiment_type to your desired assay, and authenticate using your bearer-token API key for automated execution and results retrieval.

What types of experimental assays can I run for protein design validation?

Protein design validation supports running binding assays like BLI, expression testing, thermostability measurements, and enzyme activity assays to evaluate sequence optimization and performance.

How do I track the status of a batch protein binding experiment?

You track batch protein binding experiment status through the API-driven experiment management system, which handles status tracking and results retrieval with optional webhook notifications upon completion.

Do I need to optimize protein sequences for solubility before submitting a FASTA file?

You should optimize protein sequences for solubility and stability using recommended computational tools like NetSolP, SoluProt, SolubleMPNN, or ESM before submitting FASTA files to improve sequence quality.

Can I use a cloud lab API for automated protein testing without in-house experiments?

Yes, you can use the cloud lab API for automated protein testing to validate designs and receive binding, expression, thermostability, or enzyme activity results without running time-consuming in-house wet-lab experiments.

What are the limitations of using a cloud lab API for protein sequence submission?

Limitations of using a cloud lab API for protein sequence submission include strict adherence to the Adaptyv experiment_type and endpoint contract, mandatory bearer-token authentication, and FASTA-formatted inputs for reliable experiment execution.