admiral-adae

Derive an ADAE dataset from SDTM AE using the admiral R package.

93|23|Updated Mar 4, 2026
One-click install
npx skills add https://github.com/RConsortium/pharma-skills --skill admiral-adae
Or copy as Structured Prompt for Agent
Please help me install this Agent Skill.
Skill: admiral-adae
Source: https://github.com/RConsortium/pharma-skills/tree/main/admiral/admiral-adae
Command: npx skills add https://github.com/RConsortium/pharma-skills --skill admiral-adae

SYSTEM DOCUMENTATION & REQUIREMENTS

💡 This Skill requires admiral, dplyr, lubridate, pharmaversesdtm, and includes scripts (resource) and references (resource) components.

What problem does it solve?

This Skill automates the derivation of the CDISC-conformant ADaM Adverse Events Analysis Dataset (ADAE) using the admiral R package, streamlining the process of generating ADAE datasets from SDTM AE and supporting domains.

Core Features & Use Cases

  • ADAE Derivation: Automatically derives ADAE datasets with features such as treatment-emergent flag, severity, seriousness, causality, and outcome variables.
  • R-based Analysis: Utilizes the admiral package for efficient R-based data analysis.
  • Use Case: For a clinical trial, this Skill can derive an ADAE dataset from the AE domain of the SDTM, enabling thorough safety analysis.

Quick Start

Generate an ADAE dataset from SDTM AE using the 'admiral-adae' skill.

Frequently Asked Questions about admiral-adae

High-intent search queries and answers about installing and using this skill.

FAQPage Schema
How do I derive an ADAE dataset from SDTM AE in R?

To derive an ADAE dataset from SDTM AE, use the admiral package in R to automatically generate treatment-emergent flags, severity, seriousness, causality, and outcome variables for clinical trial safety analysis.

What is the admiral package used for in clinical trial data analysis?

The admiral package is used in clinical trial data analysis to derive CDISC-conformant ADaM datasets from SDTM domains, streamlining the generation of analysis datasets like ADAE for safety evaluations.

Do I need pharmaversesdtm and dplyr to generate ADaM Adverse Events datasets?

Yes, generating ADaM Adverse Events datasets requires pharmaversesdtm for SDTM data inputs, along with admiral, dplyr, and lubridate to execute the R-based derivation workflow.

Can I automate treatment-emergent flag derivation for adverse events?

You can automate treatment-emergent flag derivation for adverse events by applying the admiral R package to your SDTM AE domain, which systematically creates these flags alongside severity and causality variables.

What is the best way to create CDISC-conformant ADAE datasets for safety analysis?

The best way to create CDISC-conformant ADAE datasets for safety analysis is using the admiral package in R, which provides standardized functions to derive required adverse event variables from SDTM inputs.

Are there limitations when using admiral for ADAE dataset derivation?

When using admiral for ADAE dataset derivation, limitations include strict dependencies on pharmaversesdtm for source data and the necessity to follow CDISC standards closely to ensure accurate safety analysis outputs.