ai-research-protocol

Structure AI-assisted research with evidence, hypotheses, experiments, and durable records.

Updated Jul 14, 2026
One-click install
npx skills add https://github.com/ttgiegi/AI-research-protocol --skill ai-research-protocol
Or copy as Structured Prompt for Agent
Please help me install this Agent Skill.
Skill: ai-research-protocol
Source: https://github.com/ttgiegi/AI-research-protocol/tree/main
Command: npx skills add https://github.com/ttgiegi/AI-research-protocol --skill ai-research-protocol

SYSTEM DOCUMENTATION & REQUIREMENTS

What problem does it solve?

This Skill prevents long-running AI-assisted research from drifting through unsupported assumptions, undocumented decisions, repeated failed experiments, and untraceable implementation changes.

Core Features & Use Cases

  • Evidence-Driven Workflow: Connect observations, hypotheses, experiments, decisions, and conclusions to authoritative sources and explicit evidence tags.
  • Durable Research Memory: Organize project metadata, knowledge state, experiment logs, question queues, implementation plans, and source registers for continuity across AI sessions.
  • Validation and Safety Gates: Require source tracing, falsifiable hypotheses, named observables, regression checks, source archaeology, and goal stops before behavior-changing modifications.
  • Focused Research Profiles: Apply specialized safeguards for paper reproduction and numerical-solver diagnosis, including paper tracing, figure calibration, numerical isolation, and reconstruction controls.
  • Use Case: Apply the Skill when reproducing a scientific paper, diagnosing solver convergence, validating a specification, or continuing a research project across multiple AI sessions without losing evidence or decision history.

Quick Start

Use the ai-research-protocol skill to map the project's authoritative sources, current knowledge, open questions, experiment history, and next highest-value research action before making any behavior-changing edit.

Frequently Asked Questions about ai-research-protocol

High-intent search queries and answers about installing and using this skill.

FAQPage Schema
How do I keep AI-assisted research traceable across multiple sessions?

To keep AI-assisted research traceable, you need durable research memory that organizes project metadata, experiment logs, and decision history. This ensures continuity and preserves evidence across multiple AI sessions without losing track of changes.

What is the best way to structure experiments for scientific paper reproduction?

The best way to structure paper reproduction is through an evidence-driven workflow that connects observations and hypotheses to authoritative sources. It requires paper tracing, figure calibration, and explicit evidence tags before making behavior-changing modifications.

How do I prevent unsupported assumptions when diagnosing numerical solver convergence?

To prevent unsupported assumptions during numerical-solver diagnosis, apply validation gates that require falsifiable hypotheses and named observables. This workflow enforces numerical isolation and reconstruction controls to trace convergence issues back to explicit evidence.

Can I use this protocol for dataset analysis and specification validation?

Yes, you can use this protocol for dataset analysis and specification validation. It structures observation-driven investigation by requiring source tracing, decision gates, and explicit stopping conditions to ensure all technical workflows remain fully traceable.

Why do I need decision gates and source archaeology in experiment logging?

Decision gates and source archaeology are needed in experiment logging to prevent undocumented modifications and repeated failed experiments. They enforce authoritative-source tracing and regression checks before allowing any behavior-changing edits, ensuring research integrity.