alterlab-clinical-decision

What problem does it solve?

Generate publication-ready clinical decision support (CDS) documents from patient cohorts, enabling researchers to translate biomarker-driven analyses into formal guidelines, reports, and regulatory-grade submissions.

Core Features & Use Cases

• Cohort Analysis & Reporting: Produce population-level analyses (biomarker strata, survival, adverse events) with publication-ready outputs.
• Treatment Recommendation Reports: Create evidence-based guidelines with GRADE grading, decision algorithms, and structured summaries.
• LaTeX/PDF Outputs: Output publication-grade LaTeX/PDF documents with templates and professional formatting.
• Visualizations & Schematics: Integrate AI-generated figures (flowcharts, diagrams) via the scientific-schematics workflow.
• Templates & Reproducibility: Leverage templates (cohort analysis, treatment recommendations, clinical pathways) and reproducible scripts for tables, figures, and TikZ diagrams.
• Regulatory & Compliance Alignment: Ensure HIPAA-safe reporting, confidentiality headers, and regulated document standards.

Quick Start

Create a complete CDS document for a defined cohort using the included templates and workflows.