alterlab-lamindb

What problem does it solve?

LaminDB provides a unified framework to manage, query, and track biological data workflows, ensuring provenance, reproducibility, and FAIR metadata across complex analyses.

Core Features & Use Cases

• Core concepts and data lineage: artifacts, records, runs, and transforms with automatic lineage capture.
• Data management and querying: registry exploration, feature-based queries, streaming, and cross-registry traversal.
• Annotation, validation, and ontologies: schema designs, ontology integration via Bionty, and standardized metadata.
• Integrations and deployment: connect with ML platforms, workflow managers, and cloud storage; supports local to cloud deployments.
• Use cases include scRNA-seq data management, building a queryable data lakehouse, and end-to-end data governance for reproducibility.

Quick Start

Install LaminDB, initialize your instance, and start tracking your first dataset.