analyze-fasta
CommunityAnalyze FASTA files and generate detailed reports.
Education & Research#sequence analysis#biopython#orf#fasta#gc content#protein properties#isoelectric point#gravy index
AuthorMubasherMohammed
Version1.0.0
Installs0
System Documentation
What problem does it solve?
This Skill simplifies the analysis of FASTA files by automatically detecting the sequence type, computing a variety of metrics, and generating a structured report.
Core Features & Use Cases
- Sequence Type Detection: Automatically identifies whether the sequence is nucleotide or protein.
- Metric Calculation: Computes metrics like GC content, molecular weight, isoelectric point, and secondary structure fractions for proteins.
- Report Generation: Produces a Markdown report with a summary table, per-sequence metrics, and an HTML version for visual inspection.
- Use Case: Ideal for bioinformatics researchers who need to quickly analyze and summarize large sets of FASTA files.
Quick Start
Run the analyze-fasta skill on the file 'sample.fasta' to generate a report.
Dependency Matrix
Required Modules
biopython
Components
scripts
💻 Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: analyze-fasta Download link: https://github.com/MubasherMohammed/opencode-BioInfo/archive/main.zip#analyze-fasta Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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