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bgpt-paper-search

Retrieve structured metadata from full-text papers via BGPT MCP.

1|Updated Mar 11, 2026
Search Tags:#research#meta-analysis#structured-data#full-text#literature-review#evidence-synthesis#bgpt
One-click install
npx skills add https://github.com/SciMate-AI/scicli --skill bgpt-paper-search-scimate-ai
Or copy as Structured Prompt for Agent▼
Please help me install this Agent Skill.
Skill: bgpt-paper-search
Source: https://github.com/SciMate-AI/scicli/tree/main/internal/skills/bundled/claude-scientific-skills/skills/bgpt-paper-search
Command: npx skills add https://github.com/SciMate-AI/scicli --skill bgpt-paper-search-scimate-ai

SYSTEM DOCUMENTATION & REQUIREMENTS

What problem does it solve?

The BGPT Paper Search skill helps researchers quickly locate full-text scientific papers and extract structured experimental data (methods, results, sample sizes, quality scores, and conclusions) from the BGPT MCP server, reducing manual screening and data extraction effort.

Core Features & Use Cases

  • Structured data extraction: retrieves 25+ metadata fields per paper, including experimental details and conclusions.
  • Evidence-synthesis workflows: supports literature reviews, meta-analyses, and evidence mapping across studies.
  • Remote server integration: leverages BGPT MCP to access curated databases without local data hosting.

Quick Start

Configure BGPT MCP server as described, then run a search_papers query with a topic like "CRISPR gene editing efficiency in human cells".

Frequently Asked Questions about bgpt-paper-search

High-intent search queries and answers about installing and using this skill.

FAQPage Schema
How do I extract structured data from full-text scientific papers for a literature review?▼

You can extract structured data from full-text scientific papers by querying the BGPT MCP server with a topic, which returns 25+ metadata fields including methods, results, sample sizes, quality scores, and conclusions for evidence synthesis.

What kind of experimental data can I retrieve for systematic reviews and meta-analyses?▼

For systematic reviews and meta-analyses, you can retrieve experimental details, methods, results, sample sizes, quality scores, and conclusions from full-text papers, reducing manual screening and data extraction effort across biology and medicine.

How do I start searching for papers once my BGPT MCP server is configured?▼

Once your BGPT MCP server is configured, start searching by running a search_papers query with a specific topic like "CRISPR gene editing efficiency in human cells" to retrieve structured experimental data.

Do I need a local database to access curated scientific literature for evidence mapping?▼

No local database is required for evidence mapping, because the skill leverages remote BGPT MCP server integration to access curated databases and retrieve structured experimental data without local data hosting.

Can I use this structured literature extraction approach for biology and medicine research workflows?▼

Yes, structured literature extraction is explicitly applied to data-extraction workflows, literature reviews, and evidence syntheses across biology and medicine research domains via the BGPT MCP server.

What are the limitations of using BGPT MCP for structured data extraction?▼

The primary limitation is that this structured data extraction requires access to a configured BGPT MCP server and uses the search_papers tool, meaning it cannot function without that specific remote server dependency.

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