bio-clinical-databases-myvariant-queries
OfficialSingle-query multi-database variant annotations.
Authorstellaromics
Version1.0.0
Installs0
System Documentation
What problem does it solve?
Query myvariant.info API to retrieve aggregated variant annotations from ClinVar, gnomAD, dbSNP, COSMIC, and other data sources in a single request, simplifying multi-database annotation workflows.
Core Features & Use Cases
- Single-variant lookups and batched processing to fetch aggregated annotations (e.g., ClinVar, gnomAD, dbSNP, COSMIC)
- Flexible input formats: HGVS notation, rsID, or gene:protein notation
- Batch up to 1000 variants per request and parse nested responses into structured data for analysis
- Integrate into bioinformatics pipelines and downstream reporting for comparative annotation analyses
Quick Start
Query myvariant.info for a set of variants and retrieve aggregated annotations across ClinVar, gnomad, and dbSNP.
Dependency Matrix
Required Modules
None requiredComponents
Standard package💻 Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: bio-clinical-databases-myvariant-queries Download link: https://github.com/stellaromics/fast-bioinfo/archive/main.zip#bio-clinical-databases-myvariant-queries Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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