bio-clinical-databases-myvariant-queries

Official

Single-query multi-database variant annotations.

Authorstellaromics
Version1.0.0
Installs0

System Documentation

What problem does it solve?

Query myvariant.info API to retrieve aggregated variant annotations from ClinVar, gnomAD, dbSNP, COSMIC, and other data sources in a single request, simplifying multi-database annotation workflows.

Core Features & Use Cases

  • Single-variant lookups and batched processing to fetch aggregated annotations (e.g., ClinVar, gnomAD, dbSNP, COSMIC)
  • Flexible input formats: HGVS notation, rsID, or gene:protein notation
  • Batch up to 1000 variants per request and parse nested responses into structured data for analysis
  • Integrate into bioinformatics pipelines and downstream reporting for comparative annotation analyses

Quick Start

Query myvariant.info for a set of variants and retrieve aggregated annotations across ClinVar, gnomad, and dbSNP.

Dependency Matrix

Required Modules

None required

Components

Standard package

💻 Claude Code Installation

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Please help me install this Skill:
Name: bio-clinical-databases-myvariant-queries
Download link: https://github.com/stellaromics/fast-bioinfo/archive/main.zip#bio-clinical-databases-myvariant-queries

Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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