bio-data-visualization-upset-plots

Official

Visualize complex overlaps with UpSet plots.

Authorstellaromics
Version1.0.0
Installs0

System Documentation

What problem does it solve?

UpSet plots provide a scalable alternative to Venn diagrams for visualizing overlaps among many sets, enabling clear interpretation of complex intersections in biological data.

Core Features & Use Cases

  • Visualize overlaps across four or more gene/peak/sample sets with customizable layouts.
  • Supports R (UpSetR) and Python (upsetplot) implementations for flexible workflows.
  • Use cases include comparing gene sets, peak lists, or sample groups in transcriptomics, genomics, and single-cell analyses.

Quick Start

Prompt the AI to generate an UpSet plot from five gene lists and export it as PNG.

Dependency Matrix

Required Modules

None required

Components

Standard package

💻 Claude Code Installation

Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.

Please help me install this Skill:
Name: bio-data-visualization-upset-plots
Download link: https://github.com/stellaromics/fast-bioinfo/archive/main.zip#bio-data-visualization-upset-plots

Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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