bio-de-deseq2-basics
CommunityDESeq2 differential expression for RNA-seq.
Authorya-way
Version1.0.0
Installs0
System Documentation
What problem does it solve?
Differential expression analysis for RNA-seq count data using DESeq2, providing a streamlined workflow to construct DESeqDataSet objects, perform the standard DESeq2 steps, apply log fold change shrinkage, and interpret results.
Core Features & Use Cases
- Create DESeqDataSet objects from count matrices and sample metadata
- Run the full DESeq2 workflow with pre-filtering, design formulas, and LFC shrinkage
- Extract, sort, and export results including log2 fold changes and adjusted p-values
Quick Start
Run DESeq2 on your RNA-seq count matrix with sample metadata to perform differential expression analysis.
Dependency Matrix
Required Modules
None requiredComponents
Standard package💻 Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: bio-de-deseq2-basics Download link: https://github.com/ya-way/cytoclaw-skills/archive/main.zip#bio-de-deseq2-basics Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
Agent Skills Search Helper
Install a tiny helper to your Agent, search and equip skill from 471,000+ vetted skills library on demand.