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bio-metabolomics-pathway-mapping

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Map metabolites to pathways and analyze enrichment

Data & Analytics#metabolomics#enrichment#reactome#kegg#pathway-mapping#smpdb#metaboanalystr
Authordailycafi
Version1.0.0
Installs0

System Documentation

What problem does it solve?

Relate metabolite lists to biological pathways to enable interpretation of metabolomics results and identify affected biological processes.

Core Features & Use Cases

  • Map metabolites to KEGG, Reactome, and SMPDB pathways and perform enrichment and topology analysis.
  • Visualize results on pathway maps, export enrichment/topology reports, and integrate with downstream interpretation workflows.
  • Support meta-analytic workflows with MetaboAnalystR and related tools for advanced pathway analyses.

Quick Start

Map your list of metabolites to biological pathways and run enrichment analysis to identify affected pathways.

Dependency Matrix

Required Modules

None required

Components

Standard package

💻 Claude Code Installation

Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.

Please help me install this Skill:
Name: bio-metabolomics-pathway-mapping
Download link: https://github.com/dailycafi/metabolism-skills/archive/main.zip#bio-metabolomics-pathway-mapping

Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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