bio-single-cell-cell-communication
CommunityMap cell conversations from single-cell data.
Data & Analytics#visualization#ligand-receptor#scrna-seq#cellchat#liana#cell-cell-communication#nichenetr
Authorya-way
Version1.0.0
Installs0
System Documentation
What problem does it solve?
Infer cell-cell communication networks from scRNA-seq data using CellChat, NicheNet, and LIANA for ligand-receptor interaction analysis. Use when inferring ligand-receptor interactions between cell types.
Core Features & Use Cases
- Integrates CellChat, NicheNet, and LIANA to identify ligand-receptor interactions and visualize intercellular signaling.
- Supports cross-method comparisons across conditions or cell types, with pathway-level aggregation and visualization.
- Example: compare signaling between macrophages and T cells across control vs treated samples.
Quick Start
Run an analysis to identify and visualize intercellular communications among defined cell types using the three tools.
Dependency Matrix
Required Modules
None requiredComponents
Standard package💻 Claude Code Installation
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Please help me install this Skill: Name: bio-single-cell-cell-communication Download link: https://github.com/ya-way/cytoclaw-skills/archive/main.zip#bio-single-cell-cell-communication Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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