bio-single-cell-perturb-seq
CommunityAnalyze Perturb-seq CRISPR in single cells.
Authorya-way
Version1.0.0
Installs0
System Documentation
What problem does it solve?
Biologists need to link pooled genetic perturbations to transcriptional outcomes in single cells, enabling function discovery from Perturb-seq and CROP-seq experiments.
Core Features & Use Cases
- Differential perturbation analysis across single-cell profiles
- Perturbation signature computation and clustering of perturbations by phenotype
- Seamless integration with scRNA-seq workflows (Scanpy, Pertpy) and downstream enrichment analyses
Quick Start
Load your perturb-seq scRNA-seq data and run differential expression per perturbation to identify functional gene effects.
Dependency Matrix
Required Modules
None requiredComponents
Standard package💻 Claude Code Installation
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Please help me install this Skill: Name: bio-single-cell-perturb-seq Download link: https://github.com/ya-way/cytoclaw-skills/archive/main.zip#bio-single-cell-perturb-seq Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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