Skills
.Work. You
Rest

bio-workflows-methylation-pipeline

Community

End-to-end BS-seq analysis to DMRs.

Data & Analytics#genomics#methylation#dmr#bisulfite#methylkit#bs-seq
Authorya-way
Version1.0.0
Installs0

System Documentation

What problem does it solve?

This end-to-end bisulfite sequencing workflow automates the analysis from raw FASTQ reads to identified differentially methylated regions, reducing manual steps and improving reproducibility.

Core Features & Use Cases

  • Align bisulfite reads with Bismark and call methylation
  • Analyze methylation with methylKit to identify DMRs and annotate genomic features
  • Use cases include whole-genome bisulfite sequencing (WGBS) and RRBS data to compare conditions and generate methylation reports

Quick Start

Run the methylation pipeline on bisulfite sequencing data to generate DMR results.

Dependency Matrix

Required Modules

None required

Components

Standard package

💻 Claude Code Installation

Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.

Please help me install this Skill:
Name: bio-workflows-methylation-pipeline
Download link: https://github.com/ya-way/cytoclaw-skills/archive/main.zip#bio-workflows-methylation-pipeline

Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
View Source Repository

Agent Skills Search Helper

Install a tiny helper to your Agent, search and equip skill from 471,000+ vetted skills library on demand.