bio-workflows-multi-omics-pipeline
CommunityEnd-to-end multi-omics integration workflow.
Authorya-way
Version1.0.0
Installs0
System Documentation
What problem does it solve?
Integrates multiple omics datasets (transcriptomics, proteomics, metabolomics) to uncover shared biology, enabling cross-modal biomarker discovery and patient stratification.
Core Features & Use Cases
- End-to-end multi-omics integration using MOFA2, DIABLO, and SNF for both unsupervised discovery and supervised analyses.
- Data harmonization, feature selection, factor interpretation, and downstream analyses across modalities.
- Use Case: Discover shared biological signals and stratify patients using integrated omics signatures.
Quick Start
Load transcriptomics, proteomics, and metabolomics data and run the end-to-end multi-omics pipeline to discover shared signals across modalities.
Dependency Matrix
Required Modules
None requiredComponents
Standard package💻 Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: bio-workflows-multi-omics-pipeline Download link: https://github.com/ya-way/cytoclaw-skills/archive/main.zip#bio-workflows-multi-omics-pipeline Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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