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bio-workflows-timecourse-pipeline

Official

End-to-end time-course analysis.

Data & Analytics#trajectory#enrichment#clustering#multi-omics#circadian#time-course#temporal-de
Authorstellaromics
Version1.0.0
Installs0

System Documentation

What problem does it solve?

Analyze time-course expression data to uncover dynamic transcriptional programs, cluster trajectories, and interpret biology via enrichment.

Core Features & Use Cases

  • End-to-end pipeline from temporal differential expression to clustering and enrichment.
  • Supports circadian and trajectory analyses across R and Python implementations.
  • Generates per-cluster trajectories and interpretable enrichment results for downstream reporting.

Quick Start

Run the time-course pipeline on a batch of time-point samples to identify temporal gene modules and enriched pathways.

Dependency Matrix

Required Modules

None required

Components

Standard package

💻 Claude Code Installation

Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.

Please help me install this Skill:
Name: bio-workflows-timecourse-pipeline
Download link: https://github.com/stellaromics/fast-bioinfo/archive/main.zip#bio-workflows-timecourse-pipeline

Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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