bioinformatics

Fetch bioinformatics skills and pipelines from bioSkills and ClawBio repositories.

1|1|Updated May 9, 2026
One-click install
npx skills add https://github.com/ldzhhxx/Hermes_offline_v2 --skill bioinformatics-ldzhhxx
Or copy as Structured Prompt for Agent
Please help me install this Agent Skill.
Skill: bioinformatics
Source: https://github.com/ldzhhxx/Hermes_offline_v2/tree/main/hermes-agent/optional-skills/research/bioinformatics
Command: npx skills add https://github.com/ldzhhxx/Hermes_offline_v2 --skill bioinformatics-ldzhhxx

SYSTEM DOCUMENTATION & REQUIREMENTS

💡 This Skill requires git, python, r, and includes scripts (resource) and references (resource) and assets (resource) components.

What problem does it solve?

This Skill unit provides a comprehensive repository of bioinformatics resources to simplify and speed up genomic research and analysis.

Core Features & Use Cases

  • Bioinformatics Library Gateway: Provides access to 385 reference skills and 33 runnable pipeline skills from bioSkills and ClawBio.
  • Domain-specific Material: Offers genomics, transcriptomics, single-cell, variant calling, pharmacogenomics, metagenomics, structural biology, and more.
  • On-demand Reference Material: Fetches specific domain knowledge as needed for various biological tasks.

Quick Start

To use the bioinformatics skill, identify the relevant domain and skill from the index, clone the relevant repository, and follow the provided instructions to access and use the skill.

Frequently Asked Questions about bioinformatics

High-intent search queries and answers about installing and using this skill.

FAQPage Schema
How do I access specialized genomic analysis pipelines for transcriptomics and variant calling?

You can access genomic analysis pipelines by fetching the 33 runnable pipeline skills and 385 reference materials from the bioSkills and ClawBio repositories provided by this Skill.

What computational biology domains are covered for single-cell and metagenomics research?

Computational biology domains covered include genomics, transcriptomics, single-cell analysis, variant calling, pharmacogenomics, metagenomics, and structural biology resources fetched on demand.

Do I need Python and R installed to run these bioinformatics data analysis skills?

Yes, you need Python and R installed, along with git and command-line tools, because executing these bioinformatics data analysis skills requires these dependencies for processing scripts.

What is the best way to start using the bioinformatics repository skills for my research?

The best way to start using these bioinformatics repository skills is to identify your relevant domain from the index, clone the repository using git, and follow the provided instructions to access the skill.

Can I use these computational biology resources for pharmacogenomics and structural biology tasks?

Yes, you can use these computational biology resources for pharmacogenomics and structural biology tasks, as the Skill specifically fetches on-demand reference materials tailored for these domains.