biomni

Integrate biomedical data retrieval, analysis, and reasoning into automated research workflows.

Updated May 10, 2026
One-click install
npx skills add https://github.com/Imad-Oute/ResearchForge --skill biomni-imad-oute
Or copy as Structured Prompt for Agent
Please help me install this Agent Skill.
Skill: biomni
Source: https://github.com/Imad-Oute/ResearchForge/tree/main/OpenSource-Projects/claude-scientific-skills/scientific-skills/biomni
Command: npx skills add https://github.com/Imad-Oute/ResearchForge --skill biomni-imad-oute

SYSTEM DOCUMENTATION & REQUIREMENTS

💡 This Skill requires biomni, and includes scripts (resource) and references (resource) components.

What problem does it solve?

Academic researchers face the challenge of coordinating multi-step biomedical analyses involving diverse data sources and complex workflows.

Core Features & Use Cases

  • Automated Biomedical Reasoning: Decomposes research questions into manageable sub-tasks, combining knowledge retrieval and code execution.
  • Multi-domain Data Integration: Accesses extensive biomedical databases, literature, and structural resources for comprehensive analysis.
  • Use Case: For example, designing a CRISPR screen for gene regulation, analyzing single-cell RNA-seq datasets, or predicting drug ADMET properties can be performed automatically.

Quick Start

Initialize the agent with relevant biomedical data paths and pose your research question for autonomous execution.

Frequently Asked Questions about biomni

High-intent search queries and answers about installing and using this skill.

FAQPage Schema
How do I automate multi-step biomedical research workflows for genomics and drug discovery?

You can automate biomedical research workflows by initializing the agent with relevant data paths and posing your research question for autonomous execution across data analysis and literature synthesis.

What is autonomous biomedical reasoning for complex research tasks?

Autonomous biomedical reasoning is the process of decomposing research questions into manageable sub-tasks, combining knowledge retrieval and code execution to perform comprehensive analyses automatically.

Can I analyze single-cell RNA-seq datasets and design CRISPR screens automatically?

Yes, you can analyze single-cell RNA-seq datasets and design CRISPR screens for gene regulation automatically, alongside predicting drug ADMET properties through multi-domain data integration.

How do I integrate biomedical databases and literature mining tools for experimental design?

Multi-domain data integration accesses extensive biomedical databases, literature, and structural resources by requiring biomedical databases, code execution environments, and literature mining tools for comprehensive analysis.

Does biomni require a specific code execution environment for clinical studies?

Yes, biomni requires biomedical databases, code execution environments, and literature mining tools to facilitate comprehensive research workflows across genomics, pharmacology, and clinical studies.

What are the limitations of automating pharmacology and clinical study workflows?

Limitations of automating pharmacology workflows depend on the accessibility of biomedical databases and the code execution environment, requiring scientists to initialize the agent with relevant data paths for accurate reasoning.