Guide bip CLI usage for local paper searches and reference library management.
npx skills add https://github.com/matsen/bipartite --skill bip
Please help me install this Agent Skill. Skill: bip Source: https://github.com/matsen/bipartite/tree/main/skills/bip Command: npx skills add https://github.com/matsen/bipartite --skill bip
Unified guidance for effectively using the bip CLI to search papers, manage the local library, and explore literature via S2/ASTA.
Run bip search 'phylogenetics' --human to see local results.
High-intent search queries and answers about installing and using this skill.
Run bip search 'query' --human to locate papers locally. The bip CLI enforces a local-first policy, ensuring searches query your local reference library before attempting any external requests.
You can manage your local reference library by using bip CLI commands to add, export, and sync references. Guidance covers library maintenance workflows to keep your local collection organized and up-to-date.
External S2 or ASTA queries are optional and require explicit permission, used only when local searches lack needed literature. The bip CLI enforces a local-first policy to prioritize local library results before external exploration.
The bip CLI enforces clear safety rules including a strict local-first policy and permission-based external queries. This ensures reliable command usage and accurate guidance for typical laboratory research tasks without unintended external access.
Yes, the bip CLI supports library management tasks including exporting references. You can export your local reference collection as part of the library maintenance workflows provided by the guidance.
Yes, the bip CLI operates with no dependencies and enforces a local-first policy. Core search and library management tasks function entirely locally, with external S2/ASTA queries being optional and permission-based.
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