cell-communication-cellphonedb
CommunityIdentify key cell-type ligand-receptor signals.
Authorchenyhvvvv
Version1.0.0
Installs0
System Documentation
What problem does it solve?
Analyzes cell-cell communication in single-cell data by identifying significant ligand-receptor interactions between cell types using CellPhoneDB’s statistical framework.
Core Features & Use Cases
- Permutation-based identification of LR interactions across cell-type pairs in human datasets.
- Outputs include per-interaction means, p-values, and a summarized reporting in adata.uns.
- Use Case: researchers can map communication networks to understand tissue microenvironment dynamics.
Quick Start
Run this skill on your annotated human single-cell dataset to identify significant ligand-receptor interactions between cell types.
Dependency Matrix
Required Modules
None requiredComponents
Standard packageđź’» Claude Code Installation
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Please help me install this Skill: Name: cell-communication-cellphonedb Download link: https://github.com/chenyhvvvv/STAT-agent/archive/main.zip#cell-communication-cellphonedb Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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