channel-name-parsing
CommunityFlexible parser for CHANNELNAMES formats.
Authorsmith6jt-cop
Version1.0.0
Installs0
System Documentation
What problem does it solve?
Parsing CHANNELNAMES.txt files across microscopy systems can be inconsistent. This Skill auto-detects formats and extracts channel names per cycle for robust labeling.
Core Features & Use Cases
- Auto-detects and parse four formats: Simple List, Cycle-Prefixed, Tab-Separated, and CSV.
- Returns a mapping of cycle numbers to channel names for downstream labeling.
- Example usage with a sample meta directory to produce channel dictionaries.
Quick Start
Call load_channel_names(meta_dir) to obtain a dict like {1: ["DAPI", "Blank", "Blank", "Blank"], 2: ["DAPI", "CD31", "CD8", "CD45"]}. If no file is found, fall back to a manual definition.
Dependency Matrix
Required Modules
None requiredComponents
Standard package💻 Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: channel-name-parsing Download link: https://github.com/smith6jt-cop/Skills_Registry/archive/main.zip#channel-name-parsing Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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