chemist
CommunityTurn SMILES into drug-likeness insights
Education & Research#medicinal chemistry#drug-likeness#ADMET#compound similarity#smiles parsing#structure-activity relationship#phytochemicals
AuthorOpenSourcePharmaFoundation
Version1.0.0
Installs0
System Documentation
What problem does it solve?
Chemist helps you analyze molecular structures and translate SMILES/descriptor data into actionable views of drug-likeness, similarity, and likely pharmacological behavior for repurposing and hypothesis generation.
Core Features & Use Cases
- Structure-first analysis: Interprets SMILES to recognize scaffolds, functional groups, stereochemistry, and likely chemistry-relevant implications.
- Descriptor-informed drug-likeness: Evaluates physicochemical properties (e.g., MW, logP/logD, PSA, HBD/HBA, Ro5 violations, QED) to estimate absorption/liability risk and overall drug-likeness.
- Mechanism-by-structure reasoning: Infers plausible pharmacological classes and candidate mechanisms by comparing structural features to known actives and target-binding motifs.
- Similarity-driven comparison: Compares two or more compounds to identify scaffold/pharmacophore overlap and how substituent differences may affect SAR, selectivity, and ADMET risk.
- Ayurveda compound context: Applies medicinal-chemistry reasoning specifically to plant-derived phytochemical classes (alkaloids, flavonoids, terpenes/phenolics, saponins, tannins) and their typical property patterns.
Quick Start
Use the chemist skill to assess two compounds by their SMILES, compare their key structural features and drug-likeness descriptors, and propose the most likely pharmacological class and repurposing relevance.
Dependency Matrix
Required Modules
None requiredComponents
Standard package💻 Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: chemist Download link: https://github.com/OpenSourcePharmaFoundation/ospf-ayurveda-kg/archive/main.zip#chemist Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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