chemist

Community

Turn SMILES into drug-likeness insights

AuthorOpenSourcePharmaFoundation
Version1.0.0
Installs0

System Documentation

What problem does it solve?

Chemist helps you analyze molecular structures and translate SMILES/descriptor data into actionable views of drug-likeness, similarity, and likely pharmacological behavior for repurposing and hypothesis generation.

Core Features & Use Cases

  • Structure-first analysis: Interprets SMILES to recognize scaffolds, functional groups, stereochemistry, and likely chemistry-relevant implications.
  • Descriptor-informed drug-likeness: Evaluates physicochemical properties (e.g., MW, logP/logD, PSA, HBD/HBA, Ro5 violations, QED) to estimate absorption/liability risk and overall drug-likeness.
  • Mechanism-by-structure reasoning: Infers plausible pharmacological classes and candidate mechanisms by comparing structural features to known actives and target-binding motifs.
  • Similarity-driven comparison: Compares two or more compounds to identify scaffold/pharmacophore overlap and how substituent differences may affect SAR, selectivity, and ADMET risk.
  • Ayurveda compound context: Applies medicinal-chemistry reasoning specifically to plant-derived phytochemical classes (alkaloids, flavonoids, terpenes/phenolics, saponins, tannins) and their typical property patterns.

Quick Start

Use the chemist skill to assess two compounds by their SMILES, compare their key structural features and drug-likeness descriptors, and propose the most likely pharmacological class and repurposing relevance.

Dependency Matrix

Required Modules

None required

Components

Standard package

💻 Claude Code Installation

Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.

Please help me install this Skill:
Name: chemist
Download link: https://github.com/OpenSourcePharmaFoundation/ospf-ayurveda-kg/archive/main.zip#chemist

Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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