clinical-decision-support

Generate publication-ready clinical decision support documents from biomarker-guided cohort analyses.

22|4|Updated May 25, 2026
One-click install
npx skills add https://github.com/crazymsn/academic-skills --skill clinical-decision-support-crazymsn
Or copy as Structured Prompt for Agent
Please help me install this Agent Skill.
Skill: clinical-decision-support
Source: https://github.com/crazymsn/academic-skills/tree/main/academic-skills/clinical-decision-support
Command: npx skills add https://github.com/crazymsn/academic-skills --skill clinical-decision-support-crazymsn

SYSTEM DOCUMENTATION & REQUIREMENTS

💡 This Skill requires pandas, numpy, scipy, lifelines, matplotlib, requests, scikit-learn, and includes scripts (resource) and references (resource) and assets (resource) components.

What problem does it solve?

This Skill enables the rapid creation of standardized, publication-grade clinical decision documents for pharmaceutical research, medical affairs, and guideline development by synthesizing cohort analyses, evidence reviews, and treatment recommendations into production-ready LaTeX/PDF outputs.

Core Features & Use Cases

  • Generate Patient Cohort Analysis reports with biomarker stratification and statistical comparisons
  • Produce Treatment Recommendation Reports using GRADE methodology and evidence tables
  • Create Clinical Pathways and decision algorithms with TikZ flowcharts
  • Provide publication-ready documents suitable for regulatory submissions and scientific manuscripts
  • Leverage templates, references, and assets to ensure consistency, reproducibility, and compliance

Quick Start

Create a publication-ready CDS document for a biomarker-defined cohort using the included templates and references.

Frequently Asked Questions about clinical-decision-support

High-intent search queries and answers about installing and using this skill.

FAQPage Schema
How do I generate publication-ready clinical decision support documents from cohort data?

Generate publication-ready clinical decision support documents by synthesizing biomarker-guided cohort analyses and GRADE-based evidence into reproducible LaTeX/PDF outputs. The skill applies YAML frontmatter and TikZ templates to ensure regulator-grade formatting.

Can I create GRADE-based treatment recommendations with LaTeX and TikZ flowcharts?

Yes, you can produce treatment recommendation reports using GRADE methodology and generate clinical pathways with TikZ flowcharts. The skill leverages LaTeX templating to format evidence tables and decision algorithms into standardized outputs.

Does this clinical decision support tool work with pandas and lifelines for survival analysis?

The skill utilizes pandas, numpy, scipy, and lifelines to perform statistical comparisons and cohort analyses on biomarker-stratified data. These dependencies enable survival analysis and population-level evidence synthesis.

What's the best way to standardize clinical pathways for regulatory submissions?

Standardize clinical pathways for regulatory submissions by applying YAML frontmatter-driven structures and GRADE-based recommendations. The skill ensures reproducibility and compliance through predefined templates, references, and asset components.

Can I use scikit-learn for biomarker stratification in clinical decision support reports?

You can use scikit-learn alongside numpy and scipy to perform biomarker stratification and statistical modeling for cohort analysis. The skill integrates these analytical results into publication-ready clinical decision support documents.

Are there limitations when generating evidence synthesis documents for clinical research?

Evidence synthesis document generation requires biomarker-guided data and strict YAML frontmatter formatting. The skill is designed for population-level analyses and guideline development, so outputs depend on the quality of input cohort data and GRADE evidence tables.