cultivarium-data
OfficialQuery Cultivarium CVM strain data across genomes.
System Documentation
What problem does it solve?
Look up Cultivarium's public CVM strain dataset — strain inventory, genome assembly metadata, ORI/plasmid screen results, growth/media screen data, MIC antibiotic susceptibility, methylation motifs and RM gene annotations, and ML-predicted phenotypes (optimal temperature, pH, salinity, oxygen tolerance). Use whenever the user asks about a CVM strain (e.g. CVM022, CVM086) or wants to filter Cultivarium's strain data — which ORIs work in a strain, what media a strain grows in, antibiotic resistance, methylation motifs, predicted growth conditions, ATCC/DSM/NCBI cross-references, or genome download links.
Core Features & Use Cases
- Retrieve strain inventories, genome assembly metadata, ORI screen results, and growth/media data for CVM strains.
- Cross-reference strains to public catalogs (ATCC, DSM, NCBI) and map identifiers across datasets.
- Explore methylation motifs, RM gene annotations, and ML-predicted phenotypes (temperature, pH, salinity, oxygen tolerance) for a strain.
Quick Start
Ask it to fetch all available data for a specific CVM strain (e.g. CVM022), including genome, growth conditions, and MIC info.
Dependency Matrix
Required Modules
None requiredComponents
💻 Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: cultivarium-data Download link: https://github.com/cultivarium/hermes-starter-kit/archive/main.zip#cultivarium-data Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
Agent Skills Search Helper
Install a tiny helper to your Agent, search and equip skill from 471,000+ vetted skills library on demand.