cytoclaw-analysis-report

Package CytoClaw analysis results into a mobile-friendly HTML report with embedded base64 figures.

Updated Mar 30, 2026

Search Tags:#html #single-cell #report #data-visualization #scRNA-seq #base64 #mobile-friendly

Ready to run

npx skills add https://github.com/ya-way/cytoclaw-skills --skill cytoclaw-analysis-report

💬 Prompt for ChatGPT / Claude Chat▼

Please help me install this Agent Skill.
Skill: cytoclaw-analysis-report
Source: https://github.com/ya-way/cytoclaw-skills/tree/main/workspace/skills/cytoclaw-analysis-report
Command: npx skills add https://github.com/ya-way/cytoclaw-skills --skill cytoclaw-analysis-report

SYSTEM DOCUMENTATION & REQUIREMENTS

What problem does it solve?

Packaging complete CytoClaw analysis results into a single, portable HTML report that is readable on mobile devices and suitable for sharing with collaborators or for journal submission.

Core Features & Use Cases

Self-contained reports: embeds all figures as base64 images, avoiding external assets.
Mobile-friendly styling: designed for readability on phones and tablets.
Reproducibility: outputs a single HTML file with consistent visuals and metadata.

Quick Start

Create Analysis_Report.html from the latest analysis outputs, embedding all figures as base64 and styling for mobile readability.

Frequently Asked Questions about cytoclaw-analysis-report

High-intent search queries and answers about installing and using this skill.

FAQPage Schema

How do I package scRNA-seq analysis plots into a single HTML report?▼

You can generate a self-contained HTML report by embedding all scRNA-seq figures as base64 images. This creates a portable, mobile-friendly file that avoids external asset dependencies and ensures consistent visualization across devices.

What is the best way to share single-cell data visualization results with collaborators?▼

Sharing single-cell data visualization results is best done by generating a single, self-contained HTML file. By embedding figures as base64 images, collaborators can view the complete analysis report directly on mobile devices without needing additional software.

Do I need Harmony-corrected plots before generating a mobile-friendly analysis report?▼

Yes, Harmony-corrected plots are required before generating a mobile-friendly analysis report. The packaging process takes these completed scRNA-seq analysis outputs and embeds them as base64 images into the final styled HTML deliverable.

How does embedding base64 images in an HTML report improve portability?▼

Embedding base64 images in an HTML report improves portability by converting visual data into text strings directly within the file. This eliminates the need to manage external image assets, ensuring the scRNA-seq analysis visuals remain intact when shared.

Can I use a single HTML file for publication-ready scRNA-seq data visualization?▼

Yes, a single HTML file can be used for publication-ready scRNA-seq data visualization. The output provides reproducible visuals and metadata styled per a CSS theme, making it suitable for journal submission and collaborative review.