do.organize

Scan DeepOrbit vault folders and generate reorganization plans.

6|3|Updated Mar 4, 2026

Search Tags:#cleanup #metadata #organization #vault #workflows #frontmatter

Ready to run

npx skills add https://github.com/dull-bird/DeepOrbit --skill do-organize

💬 Prompt for ChatGPT / Claude Chat▼

Please help me install this Agent Skill.
Skill: do.organize
Source: https://github.com/dull-bird/DeepOrbit/tree/main/skills/do.organize
Command: npx skills add https://github.com/dull-bird/DeepOrbit --skill do-organize

SYSTEM DOCUMENTATION & REQUIREMENTS

What problem does it solve?

The Vault Custodian helps you automatically identify and fix organizational issues in the DeepOrbit vault, reducing clutter and ensuring consistent metadata.

Core Features & Use Cases

Automatic health checks of key folders (40_Wiki, 20_Projects, 00_Inbox) to surface empty folders, orphan notes, and missing frontmatter.
Propose and execute reorganization plans to merge overlapping taxonomies and improve navigation.
Update frontmatter metadata programmatically to maintain consistency and searchability.

Quick Start

Instruct the Vault Custodian to scan the vault and present a reorganization plan, then approve the plan to apply changes.

Frequently Asked Questions about do.organize

High-intent search queries and answers about installing and using this skill.

FAQPage Schema

How do I find and remove orphan notes in my vault?▼

To find and remove orphan notes in your vault, this Skill scans core folders like 40_Wiki and 00_Inbox to surface unlinked files and empty directories. It then generates a reorganization plan for approval before execution.

How do I update frontmatter metadata across multiple markdown files?▼

You can update frontmatter metadata programmatically by running Python scripts through this Skill. After scanning for missing metadata, it proposes updates and applies the frontmatter changes deterministically once you approve the plan.

What is the best way to automate DeepOrbit vault cleanup?▼

The best way to automate DeepOrbit vault cleanup is to use a script-driven workflow that analyzes vault health. This Skill surfaces organizational issues in folders like 20_Projects and executes reorganization plans after user approval.

Can I merge overlapping taxonomies in my personal knowledge management system?▼

Yes, you can merge overlapping taxonomies in your personal knowledge management system by applying a generated reorganization plan. This Skill identifies structural overlaps and proposes deterministic merges to improve navigation.

Does vault reorganization require manual file movement after scanning?▼

Vault reorganization does not require manual file movement after scanning. This Skill executes a deterministic, script-driven workflow that automatically updates frontmatter and reorganizes folders once you approve the proposed plan.

Why does my vault health check surface empty folders and missing metadata?▼

A vault health check surfaces empty folders and missing metadata to identify organizational drift over time. This Skill scans directories like 00_Inbox and 40_Wiki to pinpoint these structural issues and propose targeted reorganization fixes.