drug-discovery

Analyzes molecular properties and drug-likeness for pharmaceutical research workflows.

Updated May 14, 2026
One-click install
npx skills add https://github.com/SethyPagna/Secretary-Jarvis --skill drug-discovery-sethypagna
Or copy as Structured Prompt for Agent
Please help me install this Agent Skill.
Skill: drug-discovery
Source: https://github.com/SethyPagna/Secretary-Jarvis/tree/main/src/capabilities/optional-skills/research/drug-discovery
Command: npx skills add https://github.com/SethyPagna/Secretary-Jarvis --skill drug-discovery-sethypagna

SYSTEM DOCUMENTATION & REQUIREMENTS

💡 This Skill includes scripts (resource) and references (resource) components.

What problem does it solve?

This Skill helps researchers quickly evaluate compounds, targets, and safety signals without manually stitching together multiple chemistry and pharmacology data sources.

Core Features & Use Cases

  • Target and compound search: Find bioactive compounds, retrieve ChEMBL activity data, and inspect molecule properties from public databases.
  • Drug-likeness and ADMET review: Apply Lipinski, Veber, CNS penetration, metabolism, and toxicity heuristics to assess developability.
  • Interaction and disease context: Look up drug interactions, adverse event signals, and gene-disease associations for safer decision-making.
  • Use case: A medicinal chemist can screen a shortlist of leads, compare their properties, and identify optimization opportunities before the next synthesis cycle.

Quick Start

Ask this skill to analyze a drug candidate or target name and return its key properties, rule-of-five status, ADMET risks, and relevant public database findings.

Frequently Asked Questions about drug-discovery

High-intent search queries and answers about installing and using this skill.

FAQPage Schema
How do I analyze drug-likeness and ADMET properties for pharmaceutical research?

Analyze drug-likeness and ADMET properties by applying Lipinski, Veber, CNS penetration, metabolism, and toxicity heuristics to assess compound developability. This process evaluates molecular properties retrieved from public chemistry databases to identify potential safety risks.

How does compound profiling and target search work with ChEMBL and PubChem?

Compound profiling and target search work by querying free-public APIs like ChEMBL and PubChem to retrieve bioactive compound data and extract structured molecular properties. This allows researchers to inspect molecule properties and gather activity data for pharmaceutical targets.

Can I use this for lead optimization workflows and batch processing?

Yes, you can use this for lead optimization workflows and optional script-driven batch processing. Medicinal chemists can screen a shortlist of leads, compare their molecular properties, and identify optimization opportunities before the next synthesis cycle.

What's the best way to look up drug interactions and disease associations?

The best way to look up drug interactions and disease associations is querying integrated pharmacology data sources like OpenTargets. This retrieves adverse event signals and gene-disease associations, providing safer decision-making context for drug discovery.

Does this drug discovery tool support free-public API querying without dependencies?

Yes, this drug discovery tool supports free-public API querying and rule-based assessment without external dependencies. It extracts structured property data from public databases to evaluate compounds, targets, and safety signals automatically.

Why do I need to check Veber rules and CNS penetration for drug discovery?

You need to check Veber rules and CNS penetration during drug discovery to evaluate compound developability and predict absorption or distribution. Applying these pharmacology heuristics helps identify optimization opportunities and safety risks early.