eeg-preprocess
CommunityPreprocess raw EEG into ICA-ready data.
Education & Research#batch processing#reproducibility#eeg preprocessing#mne python#bad channel detection#re-referencing#line noise removal
Authordengzhe-hou
Version1.0.0
Installs0
System Documentation
What problem does it solve?
Converts messy raw EEG recordings into a clean, standardized, preprocessed dataset by filtering, line-noise removal, bad-channel detection, interpolation, and re-referencing so downstream ERP/TFR/ICA steps become reliable and reproducible.
Core Features & Use Cases
- Canonical EEG preprocessing pipeline: filter → bad-channel detection (RANSAC/PREP-style options) → interpolation → re-reference → optional resampling, with order preserved to reduce methodological bias.
- Backend-validated execution: verifies the computation environment via ENVIRONMENT.json and uses MNE-Python for deterministic preprocessing.
- Study-ready outputs: writes per-subject preprocessed FIF files plus structured summaries for auditing and methods reporting.
- Use Case: Starting a new EEG study from raw recordings, especially when you need paper-grade preprocessing logs that later skills can verify.
Quick Start
Run eeg-preprocess in your project folder by pointing it at the study directory containing DATASET_BRIEF.md, ENVIRONMENT.json, and raw/ files.
Dependency Matrix
Required Modules
None requiredComponents
Standard package💻 Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: eeg-preprocess Download link: https://github.com/dengzhe-hou/auto-eeg-analysis/archive/main.zip#eeg-preprocess Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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