eeg-recipe

Execute a published EEG analysis recipe end-to-end on user data.

Updated Aug 27, 2026
One-click install
npx skills add https://github.com/dengzhe-hou/auto-eeg-analysis --skill eeg-recipe
Or copy as Structured Prompt for Agent
Please help me install this Agent Skill.
Skill: eeg-recipe
Source: https://github.com/dengzhe-hou/auto-eeg-analysis/tree/main/skills/eeg-recipe
Command: npx skills add https://github.com/dengzhe-hou/auto-eeg-analysis --skill eeg-recipe

SYSTEM DOCUMENTATION & REQUIREMENTS

What problem does it solve?

It eliminates the manual, error-prone effort of reproducing a published EEG analysis by turning a recipe plus your dataset into a complete, paper-ready output.

Core Features & Use Cases

  • End-to-end recipe execution: validates that your data shape matches the recipe, instantiates a frozen ANALYSIS_PLAN, then runs the full pipeline (preprocess → ICA → epoch → ERP/TFR and optional analyses → stats → figures → report → audit).
  • Reproducibility-ready reporting: generates COBIDAS-compliant methods text and a citation/reproducibility receipt that records recipe version, inputs, and stage outputs.
  • Guardrails before analysis: performs channel/marker/sampling-trace checks and stops on precise mismatches rather than proceeding silently.

Use cases: reproducing an existing N170/oddball/ERP protocol on a new study; generating figures and methods text for manuscript submission; running a standardized pipeline so reviewer concerns can be addressed before submission.

Quick Start

Run the eeg-recipe skill on your study directory by providing the recipe slug and the path to your project data, for example: eeg-recipe n170 --data projects/my-study.

Frequently Asked Questions about eeg-recipe

High-intent search queries and answers about installing and using this skill.

FAQPage Schema
How do I reproduce a published EEG analysis pipeline on my own dataset?

To reproduce an EEG analysis, you run a validated recipe end-to-end on your dataset, which executes preprocessing, epoching, and statistical stages to generate paper-ready figures and reports.

What is the best way to generate COBIDAS-compliant methods text for an ERP study?

Generating COBIDES-compliant methods text is automated by running a standardized EEG recipe, which produces the narrative descriptions and citation receipts needed directly for manuscript submission.

How do I check if my EEG data shape and marker codes match a specific analysis recipe?

Checking EEG data shape and marker codes against a recipe is handled by built-in guardrails that validate YAML constraints and stop the pipeline on precise channel or sampling-rate mismatches.

Can I run an EEG connectivity or microstate analysis using a predefined recipe?

Running EEG connectivity or microstate analysis is supported by recipes that define optional stages, allowing the frozen pipeline to execute these advanced analyses alongside standard ERP and TFR workflows.

What should I do if my EEG marker codes do not match the ones required by the recipe?

When EEG marker codes do not match a recipe, the pipeline performs optional marker remapping during validation, allowing your data to conform to the required analysis plan without manual file edits.

Does the EEG recipe pipeline provide a reproducibility receipt for peer review?

A reproducibility receipt is generated automatically, recording the recipe version, input data, and stage outputs to provide reviewers with a deterministic audit trail of your EEG analysis.