epi-mesa-tracing

Community

Agent-based pandemic tracing with Mesa SEIR.

Authorwuyoscar
Version1.0.0
Installs0

System Documentation

What problem does it solve?

This Skill automates the setup and execution of an agent-based SEIR simulation using Mesa to study pathogen transmission and tracing in outbreak scenarios.

Core Features & Use Cases

  • ABM-driven SEIR Modeling: Integrates Mesa to model susceptible-exposed-infected-recovered dynamics with pathogen parameterization.
  • Parameter-driven Tracing Scenarios: Supports high-CFR pathogen inputs to stress-test tracing workflows and resource allocation.
  • Use Case: Researchers can rapidly prototype outbreak scenarios by varying pathogen params and visualizing infection spread.

Quick Start

Run an initial outbreak tracing scenario by configuring a pathogen in the provided parameter file and executing the simulation script.

Dependency Matrix

Required Modules

mesapydanticnetworkx

Components

Standard package

💻 Claude Code Installation

Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.

Please help me install this Skill:
Name: epi-mesa-tracing
Download link: https://github.com/wuyoscar/ISC-Bench/archive/main.zip#epi-mesa-tracing

Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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