experimental-design

Generate reproducible experimental designs and allocation schedules for studies.

Updated Jul 1, 2026
One-click install
npx skills add https://github.com/jasrajtulsi/GRAD-SCOPE --skill experimental-design-jasrajtulsi
Or copy as Structured Prompt for Agent
Please help me install this Agent Skill.
Skill: experimental-design
Source: https://github.com/jasrajtulsi/GRAD-SCOPE/tree/main/.claude/skills/experimental-design
Command: npx skills add https://github.com/jasrajtulsi/GRAD-SCOPE --skill experimental-design-jasrajtulsi

SYSTEM DOCUMENTATION & REQUIREMENTS

💡 This Skill requires numpy, pandas, pyDOE3, and includes scripts (resource) and references (resource) components.

What problem does it solve?

This Skill helps you plan experiments before data collection so your comparisons are interpretable, your treatment assignments are reproducible, and your results are not ruined by confounding, imbalance, or pseudoreplication.

Core Features & Use Cases

  • Randomization and blocking: Create seeded allocation schedules for simple, blocked, stratified, or cluster-randomized studies.
  • DOE layout generation: Build factorial, fractional factorial, Plackett-Burman, central composite, Box-Behnken, and Latin hypercube designs.
  • Design validation: Choose the right experimental unit, identify nuisance factors, and avoid structural mistakes that cannot be fixed later in analysis.
  • Use Case: A lab planning a multi-factor validation study can generate a balanced run order, block by batch, and document the exact schedule for preregistration.

Quick Start

Ask for a randomized experimental design for your study, including the unit of randomization, blocking factors, treatment combinations, and a reproducible allocation table.

Frequently Asked Questions about experimental-design

High-intent search queries and answers about installing and using this skill.

FAQPage Schema
How do I generate a reproducible randomization schedule for a blocked experimental design?

To generate a reproducible randomization schedule for a blocked experimental design, you create a seeded allocation table that maps treatment combinations to specific blocks. This preserves the correct unit of replication and ensures exact run order regeneration for preregistration.

What is pseudoreplication and how do I avoid it when planning a cluster-randomized study?

Pseudoreplication is an experimental design error where repeated measurements from the same unit are treated as independent replicates. You avoid it in cluster-randomized studies by correctly identifying the experimental unit and allocating treatments at the proper cluster level.

How do I build a factorial design layout for screening multiple nuisance variables?

You build a factorial design layout for screening nuisance variables by generating fractional factorial or Plackett-Burman layouts that separate treatment effects from confounding factors. This structured DOE allocation preserves study interpretability before data collection begins.

Can I use Python to create a central composite design for response-surface optimization?

Yes, you can use Python to create a central composite design for response-surface optimization by leveraging libraries like pyDOE3 and pandas. This generates the structured run orders needed to map optimal factor levels and model response variables.

When should I use stratified randomization instead of simple random allocation?

You should use stratified randomization instead of simple random allocation when you need to balance specific prognostic factors or nuisance variables across treatment groups. This prevents baseline confounding and ensures study comparisons remain interpretable before data analysis.

What is the best way to document an allocation schedule for study preregistration?

The best way to document an allocation schedule for preregistration is to export a seeded, reproducible table detailing the unit of randomization, blocking factors, and treatment combinations. This provides a transparent, fixed layout that prevents structural mistakes.