exploratory-data-analysis

Analyze scientific data files and generate structured markdown EDA reports.

33.0k|3.2k|Updated Oct 19, 2025
One-click install
npx skills add https://github.com/K-Dense-AI/scientific-agent-skills --skill exploratory-data-analysis-k-dense-ai
Or copy as Structured Prompt for Agent
Please help me install this Agent Skill.
Skill: exploratory-data-analysis
Source: https://github.com/K-Dense-AI/scientific-agent-skills/tree/main/scientific-skills/exploratory-data-analysis
Command: npx skills add https://github.com/K-Dense-AI/scientific-agent-skills --skill exploratory-data-analysis-k-dense-ai

SYSTEM DOCUMENTATION & REQUIREMENTS

💡 This Skill requires numpy, pandas, biopython, h5py, pillow, and includes scripts (resource) and references (resource) and assets (resource) components.

What problem does it solve?

Automatically analyzes scientific data files across 200+ formats to generate structured exploratory data analysis reports, including format-specific metadata, quality metrics, and actionable recommendations.

Core Features & Use Cases

  • Automatic file-type detection and format-aware analysis across chemistry, biology, microscopy, spectroscopy, and general scientific data.
  • Generates markdown reports with data quality metrics, summaries, and downstream recommendations.
  • Handles large, multi-format datasets with sampling and robust error handling to guide downstream analysis.

Quick Start

Run the EDA analyzer on a given data file to produce a comprehensive Markdown report.

Frequently Asked Questions about exploratory-data-analysis

High-intent search queries and answers about installing and using this skill.

FAQPage Schema
How do I automate exploratory data analysis for scientific data files?

Automate exploratory data analysis by running this Skill on your scientific data files to auto-detect formats and generate structured markdown reports containing metadata, quality metrics, and downstream recommendations.

What is the best way to generate a data quality report for microscopy and spectroscopy files?

Generate a data quality report by applying format-aware analysis to microscopy and spectroscopy files, which produces structured summaries and quality metrics in a markdown report.

Does this EDA tool support bioinformatics and chemistry file formats?

This EDA tool supports 200+ file formats across bioinformatics, chemistry, proteomics, and microscopy, automatically detecting the file type to apply format-specific metadata extraction and analysis.

Can I run exploratory data analysis on large multi-format scientific datasets?

You can run exploratory data analysis on large multi-format scientific datasets because the Skill uses robust sampling and error handling to guide downstream analysis without failing on mixed file types.

How do I detect the file format of scientific data and get analysis recommendations?

Detect the file format of scientific data by inputting your files into the analyzer, which identifies the type, extracts format-specific metadata, and outputs actionable downstream recommendations in a markdown report.

What limitations should I expect when generating markdown reports for scientific data?

Limitations when generating markdown reports include relying on sampling for large multi-format datasets and requiring specific dependencies like pandas, numpy, and biopython for full format-aware analysis.