Extract social determinants of health and map findings to ICD-10-CM Z-codes.
npx skills add https://github.com/maziyarpanahi/openmed --skill extracting-sdoh
Please help me install this Agent Skill. Skill: extracting-sdoh Source: https://github.com/maziyarpanahi/openmed/tree/main/skills/extracting-sdoh Command: npx skills add https://github.com/maziyarpanahi/openmed --skill extracting-sdoh
This Skill recovers social determinants of health documented in clinical narratives but often missing from structured coding, then suggests relevant ICD-10-CM Z-codes for human confirmation.
Use the extracting-sdoh skill after de-identifying a clinical note and running OpenMed NER to produce span-anchored SDOH findings and candidate ICD-10-CM Z-codes for human review.
High-intent search queries and answers about installing and using this skill.
To extract social determinants of health from clinical narratives, this Skill identifies housing instability, food insecurity, and transportation barriers from text and maps them to candidate ICD-10-CM Z-codes. It requires de-identified clinical notes and OpenMed NER output to function.
Yes, you can map clinical text findings to ICD-10-CM Z-codes for health equity analytics. The Skill uses a curated lookup aligned with Gravity Project domains to map extracted spans to candidate Z55–Z65 codes for human review.
Yes, extracting SDOH requires de-identified clinical notes and OpenMed NER output. The Skill relies on span offsets, confidence scores, and NER findings to accurately surface social risks and suggest candidate Z-codes for human validation.
To generate FHIR Conditions from extracted SDOH Z-codes, the Skill preserves source spans and confidence scores to support downstream FHIR Condition or Observation workflows. It provides candidate codes for human validation without auto-billing inferred Z-codes.
A key limitation of automated SDOH extraction for medical coding is that it cannot auto-bill inferred codes. The Skill requires human validation for negation, temporality, subject context, and billing safety before applying suggested ICD-10-CM Z-codes to patient records.
You need Z-codes for risk stratification and closed-loop referrals when clinical narratives document undocumented social risks. This Skill surfaces housing and transportation risks from de-identified notes, providing candidate Z-codes for coder review and referral workflows.
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