fastq-quality-scores
CommunityAutomate quality assessment and trimming of FASTQ reads with Biopython.
Authorpradyumnasagar
Version1.0.0
Installs0
System Documentation
What problem does it solve?
This Skill automates the process of accessing, filtering, and trimming Phred quality scores in FASTQ reads, significantly speeding up the quality control workflow for high-throughput sequencing data.
Core Features & Use Cases
- Quality Score Access & Filtering: Retrieve and filter reads based on quality scores.
- Trimming: Trim low-quality ends of reads to improve downstream analysis.
- Use Case: For researchers working with large sequencing datasets, this Skill helps ensure data quality and reduces processing time.
Quick Start
Use the fastq-quality-scores skill to filter reads with a mean quality score above 30.
Dependency Matrix
Required Modules
biopythonnumpy
Components
scriptsreferences
💻 Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: fastq-quality-scores Download link: https://github.com/pradyumnasagar/open-research-skills/archive/main.zip#fastq-quality-scores Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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