fmriprep-tool
OfficialStandardized fMRI preprocessing, safely.
AuthorCUHK-AIM-Group
Version1.0.0
Installs0
System Documentation
What problem does it solve?
Streamlines standardized preprocessing of fMRI and anatomical MRI data by coordinating fMRIPrep with dependency checks, containerized execution, and QC-ready outputs to reduce setup friction and ensure reproducibility.
Core Features & Use Cases
- Dependency verification and safe installation planning via dependency-planner, ensuring Docker/Singularity readiness.
- Automatic detection of BIDS-formatted input and output directories, followed by generation of a clear, step-by-step execution plan with exact commands, flags, and estimated runtime.
- End-to-end orchestration through claw-shell after user confirmation, plus automatic post-run QC reporting and output summarization.
Quick Start
Provide a complete fMRIPrep preprocessing plan for a given BIDS dataset and confirm before execution.
Dependency Matrix
Required Modules
None requiredComponents
Standard package💻 Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: fmriprep-tool Download link: https://github.com/CUHK-AIM-Group/NeuroClaw/archive/main.zip#fmriprep-tool Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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