Generate and execute fMRIPrep preprocessing plans for BIDS datasets.
npx skills add https://github.com/CUHK-AIM-Group/NeuroClaw --skill fmriprep-tool
Please help me install this Agent Skill. Skill: fmriprep-tool Source: https://github.com/CUHK-AIM-Group/NeuroClaw/tree/main/skills/fmriprep-tool Command: npx skills add https://github.com/CUHK-AIM-Group/NeuroClaw --skill fmriprep-tool
Streamlines standardized preprocessing of fMRI and anatomical MRI data by coordinating fMRIPrep with dependency checks, containerized execution, and QC-ready outputs to reduce setup friction and ensure reproducibility.
Provide a complete fMRIPrep preprocessing plan for a given BIDS dataset and confirm before execution.
High-intent search queries and answers about installing and using this skill.
To run fMRIPrep preprocessing on a BIDS dataset, you provide the input and output directories to generate an execution plan with exact commands, confirm the plan, and orchestrate the containerized run automatically.
Yes, you need Docker or Singularity installed before running fMRI preprocessing, as the workflow includes dependency verification to ensure container readiness and reproducible execution.
BIDS validation works by automatically detecting BIDS-formatted input and output directories, verifying the dataset structure before generating a clear, step-by-step execution plan with exact commands and estimated runtime.
Yes, you can review exact fMRIPrep commands before execution starts, because the tool generates a detailed execution plan with specific flags and estimated runtime that requires your confirmation before gated execution through claw-shell.
Yes, fMRIPrep preprocessing provides quality control outputs automatically, including post-run QC reporting and output summarization to verify the standardized results of your neuroimaging workflow.
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Lord1EgyptAnalyze structural and functional neuroimaging data from fMRI and MRI modalities.
