fulltext-retrieval

Official

Batch-download OA PDFs by DOI for literature.

AuthorAperivue
Version1.0.0
Installs0

System Documentation

What problem does it solve?

Batch-downloading open-access PDFs for a list of DOIs from multiple OA sources to enable rapid literature review and meta-analysis.

Core Features & Use Cases

  • Multi-source OA retrieval: Unpaywall, Europe PMC / PMC OA, OpenAlex, and Crossref are queried to locate OA PDFs.
  • Robust input handling and fallbacks: Accepts plain DOIs or TSV with DOI/PMID; creates a manual list for DOIs that could not be retrieved.
  • Optional MD conversion: After download, PDFs can be converted to Markdown for token-efficient NLP tasks.

Quick Start

Create a DOIs file (one per line or TSV with a DOI column) and run fetch_oa.py with your input file and email to download OA PDFs.

Dependency Matrix

Required Modules

pymupdf4llm

Components

Standard package

💻 Claude Code Installation

Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.

Please help me install this Skill:
Name: fulltext-retrieval
Download link: https://github.com/Aperivue/medsci-skills/archive/main.zip#fulltext-retrieval

Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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