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gnn-visualization

Generate graph, matrix, and ontology visualizations from GNN model data.

30|3|Updated Apr 2, 2023
Search Tags:#ontology#visualization#pipeline#matrices#graphs#gnn
One-click install
npx skills add https://github.com/ActiveInferenceInstitute/GeneralizedNotationNotation --skill gnn-visualization
Or copy as Structured Prompt for Agent▼
Please help me install this Agent Skill.
Skill: gnn-visualization
Source: https://github.com/ActiveInferenceInstitute/GeneralizedNotationNotation/tree/main/src/visualization
Command: npx skills add https://github.com/ActiveInferenceInstitute/GeneralizedNotationNotation --skill gnn-visualization

SYSTEM DOCUMENTATION & REQUIREMENTS

What problem does it solve?

GNN visualization module helps researchers and engineers understand complex models by producing clear visual representations such as graphs, matrices, and state-space diagrams from model specifications.

Core Features & Use Cases

  • Graph Visualizations: generate network graphs showing state-observation-action relationships.
  • Matrix Visualizations: produce heatmaps and 3D tensors for parameter matrices.
  • Ontology Integration: map model elements to Active Inference ontology terms for interpretability.
  • Use Case: rapidly explore a GNN description to validate structure before experimentation.

Quick Start

Process a GNN Markdown file from input/gnn_files to generate visualizations in the pipeline output directory.

Frequently Asked Questions about gnn-visualization

High-intent search queries and answers about installing and using this skill.

FAQPage Schema
How do I visualize GNN model structures and matrices from markdown definitions?▼

Yes, you can visualize GNN models using parsed markdown definitions. The module processes GNN markdown files to generate network graphs, heatmaps, and 3D tensor visualizations for parameter matrices.

What is the best way to generate state-space diagrams for GNN models?▼

State-space diagrams for GNN models are generated by mapping model elements to Active Inference ontology terms. This ontology visualization approach produces clear visual representations for interpreting complex model specifications.

Can I batch process multiple GNN files to generate visualizations?▼

Batch processing GNN files applies to step-8 visualization workflows across single files or batches. The module prefers JSON-first data from Step 3 when available, applying sensible fallbacks and error handling for missing inputs.

Does GNN visualization support interactive outputs and 3D tensor rendering?▼

GNN visualization supports optional interactive outputs alongside matrix visualizations like 3D tensors and heatmaps. It applies sensible fallbacks and error handling to ensure visualization workflows complete successfully.

How do I validate a GNN description structure before experimentation?▼

To validate a GNN description structure before experimentation, rapidly explore the model using this visualization module. It produces clear visual representations like graphs and matrices from model specifications to confirm structural integrity.

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