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imaging-data-commons

Query and download public cancer imaging datasets from the NCI Imaging Data Commons.

Updated Aug 27, 2026
Search Tags:#imaging#dicom#data download#medical data#nci#cancer research
One-click install
npx skills add https://github.com/Rowtion/Bioclaw --skill imaging-data-commons-rowtion
Or copy as Structured Prompt for Agent▼
Please help me install this Agent Skill.
Skill: imaging-data-commons
Source: https://github.com/Rowtion/Bioclaw/tree/main/scientific-skills/imaging-data-commons
Command: npx skills add https://github.com/Rowtion/Bioclaw --skill imaging-data-commons-rowtion

SYSTEM DOCUMENTATION & REQUIREMENTS

💡 This Skill requires idc-index, pandas, and includes scripts (resource) and references (resource) components.

What problem does it solve?

This Skill simplifies the process of finding, querying, and downloading large-scale public cancer imaging datasets from the NCI Imaging Data Commons (IDC), eliminating the need for complex configurations or direct cloud storage access.

Core Features & Use Cases

  • Metadata Querying: Use SQL-like queries to discover imaging data based on various criteria (cancer type, modality, body part, etc.).
  • Data Downloading: Efficiently download selected DICOM files or entire collections directly to your local machine.
  • License Verification: Easily check the licensing terms for any dataset before use.
  • Use Case: A researcher needs to find all publicly available CT scans of lung cancer patients from the NLST collection for a new AI model. This Skill allows them to query IDC, filter for the specific criteria, download the relevant DICOM files, and verify the data license.

Quick Start

Use the imaging-data-commons skill to find and download 5 chest CT scan series from the NLST collection.

Frequently Asked Questions about imaging-data-commons

High-intent search queries and answers about installing and using this skill.

FAQPage Schema
How do I download public cancer imaging DICOM files from the NCI Imaging Data Commons?▼

You can download public cancer imaging DICOM files from the NCI Imaging Data Commons by using SQL-like queries to filter datasets and directly downloading selected files without requiring authentication.

Can I use SQL to query medical imaging data for specific cancer types and modalities?▼

Yes, you can use SQL-like queries to discover medical imaging data by filtering based on specific criteria like cancer type, modality, or body part before downloading the DICOM files.

Do I need authentication to access IDC radiology and pathology datasets for AI training?▼

No, you do not need authentication to access IDC radiology and pathology datasets, as the Skill supports metadata querying, data downloading, and visualization URL generation without requiring login credentials.

What is the best way to check data licenses for public cancer imaging collections before downloading?▼

The best way to check data licenses for public cancer imaging collections is to use the built-in license verification feature to review the licensing terms for any dataset before you download it.

Does the idc-index package support downloading entire NLST chest CT scan collections?▼

Yes, the idc-index package supports downloading entire collections, allowing you to efficiently download selected DICOM files or whole NLST chest CT scan series directly to your local machine.

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