isabl-run-pipeline

Community

Run Isabl apps as coordinated pipelines.

Authorjuanesarango
Version1.0.0
Installs0

System Documentation

What problem does it solve?

Coordinating and sequencing multiple Isabl applications into end-to-end pipelines to streamline complex analyses.

Core Features & Use Cases

  • Define pipeline steps (apps and order) to orchestrate diverse analyses.
  • Stage analyses, submit runs in batch or via API, and monitor progress to completion.
  • Use cases include WGS tumor-normal pipelines, RNA-Seq workflows, and single-sample analyses with dependent steps.

Quick Start

Define your pipeline steps, stage them, and then submit or monitor the run to completion.

Dependency Matrix

Required Modules

None required

Components

Standard package

💻 Claude Code Installation

Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.

Please help me install this Skill:
Name: isabl-run-pipeline
Download link: https://github.com/juanesarango/isabl-mcp/archive/main.zip#isabl-run-pipeline

Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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