isotope-flux-analysis
CommunityQuantify intracellular fluxes from 13C tracing.
Education & Research#isotopomer-analysis#13c-mfa#natural-abundance-correction#mid#flux-estimation#cobra-py
Authordailycafi
Version1.0.0
Installs0
System Documentation
What problem does it solve?
Researchers require quantitative insight into cellular metabolism by deriving intracellular fluxes from 13C tracer experiments, including correction for natural isotope abundance and interpretation of mass isotopomer distributions (MIDs).
Core Features & Use Cases
- Natural abundance correction of MID data using IsoCor.
- MID extraction, visualization, and flux estimation via MFA solvers.
- Tracer design guidance and linear/nonlinear optimization workflows for flux inference in central carbon metabolism.
Quick Start
Provide your measured MID data and tracer design to estimate intracellular fluxes.
Dependency Matrix
Required Modules
None requiredComponents
Standard package💻 Claude Code Installation
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Please help me install this Skill: Name: isotope-flux-analysis Download link: https://github.com/dailycafi/metabolism-skills/archive/main.zip#isotope-flux-analysis Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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