jupyter-notebook-analysis

Analyze Jupyter notebooks with statistical checks and publication-ready visualizations.

17|2|Updated Dec 20, 2025
One-click install
npx skills add https://github.com/Delphine-L/claude_global --skill jupyter-notebook-analysis
Or copy as Structured Prompt for Agent
Please help me install this Agent Skill.
Skill: jupyter-notebook-analysis
Source: https://github.com/Delphine-L/claude_global/tree/main/skills/analysis/jupyter-notebook
Command: npx skills add https://github.com/Delphine-L/claude_global --skill jupyter-notebook-analysis

SYSTEM DOCUMENTATION & REQUIREMENTS

What problem does it solve?

This Skill guides practitioners in building comprehensive Jupyter notebook analyses with statistical rigor, robust outlier handling, and publication-ready visualizations, reducing errors and improving reproducibility.

Core Features & Use Cases

  • Structured notebook patterns: standardized sections, headers, and reusable templates for data loading, cleaning, analysis, and visualization.
  • Statistical checks: recommended tests (Pearson correlation, Mann-Whitney U), p-values, confidence cues, and reporting conventions in plots.
  • Publication-ready visuals: guidelines for color palettes, font sizes, and figure captions to ensure print readiness.
  • Use Case: Create a notebook that analyzes a dataset, performs correlations, visualizes results, and documents methods for a scientific report.

Quick Start

Create a new notebook and apply the Jupyter Notebook Analysis Patterns template to scaffold data loading, enrichment, analysis, and figure generation.

Frequently Asked Questions about jupyter-notebook-analysis

High-intent search queries and answers about installing and using this skill.

FAQPage Schema
How do I structure a Jupyter notebook for statistical analysis and publication?

Structure your notebook with standardized sections for data loading, cleaning, analysis, and visualization using the Jupyter Notebook Analysis Patterns template. This enforces reproducibility, statistical rigor, and publication-ready formatting across multi-cell workflows with numpy, pandas, and matplotlib.

What statistical tests and checks should I include in my notebook analysis?

Include recommended statistical tests like Pearson correlation and Mann-Whitney U with p-values and confidence reporting. The Skill enforces statistical rigor by guiding test selection, results documentation, and proper reporting conventions for correlation analyses and outlier handling.

How do I create publication-ready visualizations in a Jupyter notebook?

Apply guidelines for color palettes, font sizes, and figure captions within your notebook's visualization sections. The Skill ensures plots meet publication standards through structured templates and best practices for clear visual communication alongside your analysis.

Can I use Jupyter notebooks for reproducible data analysis workflows?

Yes. The Skill applies to multi-cell notebook workflows, enforcing structured templates and documentation practices that improve reproducibility. It combines data loading, cleaning, analysis, and methods sections to create auditable, reusable analyses.

What's the best way to handle outliers and data cleaning in a notebook analysis?

Use the Skill's structured template with dedicated sections for data cleaning and robust outlier handling procedures. It guides practitioners through cleaning workflows before analysis while maintaining transparency and reproducibility in your notebook documentation.