What problem does it solve?
This Skill streamlines the analysis of medical data, including imaging metadata, biosignals, and clinical cohort tables, for research and data engineering purposes.
Core Features & Use Cases
- DICOM Inspection: Analyze DICOM files for metadata, modality mix, and create basic de-identified copies.
- Biosignal Analysis: Process and extract features from ECG, PPG, EDA, RSP, and EMG signals using NeuroKit2.
- Cohort Table Profiling: Summarize clinical datasets, checking for label balance, code distributions, and subgroup characteristics.
- Use Case: A researcher needs to quickly understand the composition of a DICOM dataset before starting a study. They can use this Skill to get a summary of modalities and studies present, and optionally generate de-identified versions for sharing.
Quick Start
Use the medical-data-tools skill to inspect the DICOM files in the '~/Downloads/imaging_data' directory recursively and output a CSV inventory.