methylation-clock

What problem does it solve?

This Skill addresses the challenge of epigenetic age computation from DNA methylation data, offering a standardized pipeline for reproducibility and accuracy.

Core Features & Use Cases

• Reproducibility: Ensures accurate reproducibility of epigenetic age predictions with explicit reproducibility outputs.
• Flexibility: Accepts either GEO accessions or local methylation files for input.
• Scalability: Supports multiple methylation clocks and various input file formats.
• Use Case: Ideal for researchers in the field of epigenetics and aging, aiming to calculate epigenetic age from methylation data derived from GEO datasets or their own experiments.

Quick Start

Use the methylation-clock skill to compute the epigenetic age from the provided methylation data using the default PyAging clocks.