mol-3d-viewer

Official

Turn SMILES into interactive 3D molecules.

AuthorInternScience
Version1.0.0
Installs0

System Documentation

What problem does it solve?

Converting SMILES strings or chemical names into tangible 3D molecular representations is time-consuming and error-prone when done manually, hindering rapid analysis and visualization.

Core Features & Use Cases

  • Convert SMILES or IUPAC names into optimized 3D coordinates suitable for visualization and downstream modeling.
  • Output standard formats (SDF, high-quality 3D render images, and interactive HTML viewers) for reporting, sharing, and web deployment.
  • Handle simple molecules and polymers, batch-process multiple inputs, and integrate with OPSIN for name-to-SMILES conversions.

Quick Start

Provide a SMILES string to generate a 3D visualization and export SDF, PNG, and HTML outputs.

Dependency Matrix

Required Modules

rdkitrequestsnumpyplaywright

Components

scriptsreferences

💻 Claude Code Installation

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Please help me install this Skill:
Name: mol-3d-viewer
Download link: https://github.com/InternScience/ChemClaw/archive/main.zip#mol-3d-viewer

Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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